2014 Publications by Science & Mathematics Faculty

Abbott, S. (2014). Simon McBurney’s ambitious pursuit of the pure maths play. Interdisciplinary Science Reviews, 39(3), 224–237. http://doi.org/10.1179/0308018814Z.00000000086

Bernhardt, H. S., & Sandwick, R. K. (2014). Purine Biosynthetic Intermediate-Containing Ribose-Phosphate Polymers as Evolutionary Precursors to RNA. Journal of Molecular Evolution, 79(3-4), 91–104. http://doi.org/10.1007/s00239-014-9640-1

Bockheim, J. G., & Munroe, J. S. (2014). Organic carbon pools and genesis of alpine soils with permafrost: A review. Arctic, Antarctic, and Alpine Research, 46(4), 987–1006. http://doi.org/10.1657/1938-4246-46.4.987

Chakrabarti, A., Xiong, Y., Sun, B., Darrell, T., Scharstein, D., Zickler, T., & Saenko, K. (2014). Modeling radiometric uncertainty for vision with tone-mapped color images. IEEE Transactions on Pattern Analysis and Machine Intelligence, 36(11), 2185–2198. http://doi.org/10.1109/TPAMI.2014.2318713

Christman, A., & Forcier, W. (2014). Maximizing revenues for on-line dial-a-ride (Vol. 8881). Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84921340456&partnerID...

Chung, H., Andrews, C., & North, C. (2014). A survey of software frameworks for cluster-based large high-resolution displays. IEEE Transactions on Visualization and Computer Graphics, 20(8), 1158–1177. http://doi.org/10.1109/TVCG.2013.272

Cooper, A. S., Pikhurko, O., Schmitt, J. R., & Warrington, G. S. (2014). Martin Gardner’s minimum no-3-in-a-line problem. American Mathematical Monthly, 121(3), 213–221. http://doi.org/10.4169/amer.math.monthly.121.03.213

Daumann, L. J., Larrabee, J. A., Ollis, D., Schenk, G., & Gahan, L. R. (2014). Immobilization of the enzyme GpdQ on magnetite nanoparticles for organophosphate pesticide bioremediation. Journal of Inorganic Biochemistry, 131, 1–7. http://doi.org/10.1016/j.jinorgbio.2013.10.007

Downey, J. S., Mashburn-Warren, L., Ayala, E. A., Senadheera, D. B., Hendrickson, W. K., McCall, L. W., … Spatafora, G. A., Goodman, S. D. (2014). In vitro manganese-dependent cross-talk between streptococcus mutans vick and GCRR: Implications for overlapping stress response pathways. PLoS ONE, 9(12). http://doi.org/10.1371/journal.pone.0115975

Endert, A., Hossain, M. S., Ramakrishnan, N., North, C., Fiaux, P., & Andrews, C. (2014). The human is the loop: new directions for visual analytics. Journal of Intelligent Information Systems, 43(3), 411–435. http://doi.org/10.1007/s10844-014-0304-9

Graham, M. J., Djorgovski, S. G., Drake, A. J., Mahabal, A. A., Chang, M., Stern, D., … Glikman, E. (2014). A novel variability-based method for quasar selection: Evidence for a rest-frame ~54 d characteristic time-scale. Monthly Notices of the Royal Astronomical Society, 439(1), 703–718. http://doi.org/10.1093/mnras/stt2499

Graham, N. (2014). Casimir energies of periodic dielectric gratings. Physical Review A - Atomic, Molecular, and Optical Physics, 90(3). http://doi.org/10.1103/PhysRevA.90.032507

Graham, N., Quandt, M., & Weigel, H. (2014). Casimir energy of frequency dependent interactions. Physical Review D - Particles, Fields, Gravitation and Cosmology, 90(8). http://doi.org/10.1103/PhysRevD.90.085004

Grogan, J., Landis, R. M., Free, C. M., Schulze, M. D., Lentini, M., & Ashton, M. S. (2014). Big-leaf mahogany Swietenia macrophylla population dynamics and implications for sustainable management. Journal of Applied Ecology, 51(3), 664–674. http://doi.org/10.1111/1365-2664.12210

Horn, C., Manduca, C., & Kauchak, D. (2014). Learning a lexical simplifier using Wikipedia (Vol. 2, pp. 458–463). Presented at the 52nd Annual Meeting of the Association for Computational Linguistics, ACL 2014 - Proceedings of the Conference. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84906932883&partnerID...

Jackson, D., Allen, D., Perfecto, I., & Vandermeer, J. (2014). Self-organization of background habitat determines the nature of population spatial structure. Oikos, 123(6), 751–761. http://doi.org/10.1111/j.1600-0706.2013.00827.x

Johnson, J. E., West, D. P., Jr., Condit, C. B., & Mahan, K. H. (2014). Strain localization in the Spanish Creek mylonite, Northern Madison Range, southwest Montana, U.S.A. Rocky Mountain Geology, 49(2), 91–114.

Kazmier, K., Sharma, S., Islam, S. M., Roux, B., Mchaourab, H. S., & Wright, E. M. (2014). Conformational cycle and ion-coupling mechanism of the Na+/hydantoin transporter Mhp1. Proceedings of the National Academy of Sciences of the United States of America, 111(41), 14752–14757. http://dx.doi.org/10.1073%2Fpnas.1410431111

Kazmier, K., Sharma, S., Quick, M., Islam, S. M., Roux, B., Weinstein, H., … McHaourab, H. S. (2014). Conformational dynamics of ligand-dependent alternating access in LeuT. Nature Structural and Molecular Biology, 21(5), 472–479. http://doi.org/10.1038/nsmb.2816

Kim, J., Ryan, P., Klepeis, K., Gleeson, T., North, K., Bean, J., … Filoon, J. (2014). Tectonic evolution of a Paleozoic thrust fault influences the hydrogeology of a fractured rock aquifer, northeastern Appalachian foreland. Geofluids, 14(3), 266–290. http://doi.org/10.1111/gfl.12076

Macdonald, F. A., Ryan-Davis, J., Coish, R. A., Crowley, J. L., & Karabinos, P. (2014). A newly identified Gondwanan terrane in the northern Appalachian Mountains: Implications for the Taconic orogeny and closure of the Iapetus Ocean. Geology, 42(6), 539–542. http://doi.org/10.1130/G35659.1

Majerczyk, C., Brittnacher, M., Jacobs, M., Armour, C. D., Bunt, R., Radey, M., … Peter Greenberg, E. (2014). Global analysis of the Burkholderia thailandensis quorum sensing-controlled regulon. Journal of Bacteriology, 196(7), 1412–1424. http://doi.org/10.1128/JB.01405-13

Majerczyk, C. D., Brittnacher, M. J., Jacobs, M. A., Armour, C. D., Radey, M. C., Bunt, R., … Greenberg, E. P. (2014). Cross-species comparison of the Burkholderia pseudomallei, Burkholderia thailandensis, and Burkholderia mallei quorum-sensing regulons. Journal of Bacteriology, 196(22), 3862–3871. http://doi.org/10.1128/JB.01974-14

McHone, J. G., Hussey II, A. M., West Jr., D. P., & Bailey, D. G. (2014). The Christmas Cove Dyke of coastal Maine, USA, and regional sources for Early Mesozoic flood basalts in northeastern North America. Atlantic Geology, 50, 66–90. http://dx.doi.org/10.4138/atlgeo.2014.004

Merchant, A. T., & Spatafora, G. A. (2014). A role for the DtxR family of metalloregulators in gram-positive pathogenesis. Molecular Oral Microbiology, 29(1), 1–10. http://doi.org/10.1111/omi.12039

Munroe, J. S., Attwood, E. C., O’Keefe, S. S., & Quackenbush, P. J. M. (2015). Eolian deposition in the alpine zone of the Uinta Mountains, Utah, USA. Catena, 124, 119–129. http://doi.org/10.1016/j.catena.2014.09.008

Newman, D. J., & Giddings, L.-A. (2014). Natural products as leads to antitumor drugs. Phytochemistry Reviews, 13(1), 123–137. http://doi.org/10.1007/s11101-013-9292-6

Prozument, K., Barratt Park, G., Shaver, R. G., Vasiliou, A. K., Oldham, J. M., David, D. E., … Field, R. W. (2014). Chirped-pulse millimeter-wave spectroscopy for dynamics and kinetics studies of pyrolysis reactions. Physical Chemistry Chemical Physics, 16(30), 15739–15751. http://doi.org/10.1039/c3cp55352c

Qiao, H., Prasada Rao, H. B. D., Yang, Y., Fong, J. H., Cloutier, J. M., Deacon, D. C., … Ward, J. (2014). Antagonistic roles of ubiquitin ligase HEI10 and SUMO ligase RNF212 regulate meiotic recombination. Nature Genetics, 46(2), 194–199. http://doi.org/10.1038/ng.2858

Shulman, L. M., & Spritzer, M. D. (2014). Changes in the sexual behavior and testosterone levels of male rats in response to daily interactions with estrus females. Physiology and Behavior, 133, 8–13. http://doi.org/10.1016/j.physbeh.2014.05.001

Tewksbury, J. J., Anderson, J. G. T., Bakker, J. D., Billo, T. J., Dunwiddie, P. W., Groom, M. J., … Trombulak, S.C., & Wheeler, T. A. (2014). Natural history’s place in science and society. BioScience, 64(4), 300–310. http://doi.org/10.1093/biosci/biu032

West Jr., D. P., Abbott Jr., R. N., Bandy, B. R., & Kunk, M. J. (2014). Protolith provenance and thermotectonic history of metamorphic rocks in eastern Jamaica: Evolution of a transform plate boundary. Bulletin of the Geological Society of America, 126(3-4), 600–614. http://doi.org/10.1130/B30704.1

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